KEGG   Bacillus subtilis subsp. subtilis 168: BSU29230
Entry
BSU29230          CDS       T00010                                 
Symbol
dnaE
Name
(RefSeq) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU29230 (dnaE)
   03430 Mismatch repair
    BSU29230 (dnaE)
   03440 Homologous recombination
    BSU29230 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU29230 (dnaE)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU29230 (dnaE)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU29230 (dnaE)
DNA replication proteins [BR:bsu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU29230 (dnaE)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU29230 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB tRNA_anti_2 DNA_pol_IIIA_C
Other DBs
NCBI-GeneID: 936593
NCBI-ProteinID: NP_390801
Pasteur: BG12583
UniProt: O34623 A0A6M3ZFD9
Position
complement(2991269..2994616)
AA seq 1115 aa
MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIAITPGEKGYIETLLEGGLFEQAAQASLEFQSIFGKGAFYFSYQPFKGNQVLSEQILKL
SEETGIPVTATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMEGLRSRFGKPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERVSMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDEARQQSPQLDKRLRESSLLQQVYSIAR
KIEGLPRHASTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRI
LPPSVNKSSFPFTVENGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKMLEALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLTAQGAVSILQAQRAVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDK
IQFIMSRAELLEDMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHINADHQVLYRLKELLGQKNVVLKQW
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgtcttttgttcacctgcaagtgcatagcgggtatagcctgctaaacagcgccgcggct
gtggaagaactcgtcagtgaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcttgcaaggcgagagggatcaac
ccaataatcggtttgacggcttctgtttttacagatgacagcgagcttgaagcatacccg
ctcgtcctgctggcaaaatcgaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatctaaatcaaaaggcggactgaagccgaaatggcttcacagttatcgagaaggg
attatcgcaataacgcccggcgaaaaaggatatattgaaacgcttcttgaaggagggctg
ttcgaacaggctgctcaagcctcgctggaatttcagtctatattcggaaagggagctttt
tatttctcctatcagccttttaaagggaatcaagtcttgtctgagcagattctaaagctg
tcagaagaaacgggtatccctgttacggccacaggcgatgtgcattacataaggaaggaa
gataaggctgcctaccgttgtttgaaagcgattaaagcgggggaaaaactgacggatgca
cccgctgaagatttgcctgatctcgatttgaaaccactcgaagaaatgcaaaacatttat
cgagagcatcccgaggcactgcaagcttctgtagagatcgcggaacaatgccgggttgac
gtcagtctcgggcagacccgtctaccgtcttttccgaccccagacggaacgtccgctgat
gattatttaacggatatctgtatggagggactccgcagccgtttcggcaagcctgatgaa
cgataccttcgccgtcttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtgtgggattttatgaagcacgcccatgaaaaagggattgttacagga
ccgggaaggggttctgcggcgggttctcttgtggcatatgtgctgtatatcacagatgtt
gacccgattaagcatcaccttctgtttgaaagatttttaaatcccgaacgcgtcagcatg
ccggatattgatattgactttcccgatactagaagggatgaagtcattcaatatgttcag
cagaaatacggtgcaatgcacgtcgcacagattatcacctttggaacacttgcggcaaag
gcggcgctccgggacgtcggcagagtattcggcgtcagcccgaaggaggcagatcagctt
gcaaaactcattccttcaagaccgggaatgacgctggatgaagcgagacagcagtcaccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctattcaattgcccgg
aaaatagaagggctgccaaggcatgcatcaacccacgcagcgggcgttgtcctgagtgaa
gaaccgttaacagatgttgttccgcttcaagaagggcatgaagggatctatttaacgcaa
tacgcgatggaccatcttgaagacttgggccttttaaaaatggatttcttaggtttgagg
aatctgacacttattgaatccatcacttcaatgattgaaaaagaagaaaatattaaaata
gacctttcaagtatttcctacagcgatgacaaaacgttctccttgctgtcaaaaggggat
acgacaggcattttccagcttgaatctgcagggatgagaagcgtcttgaaacggctgaaa
ccttcgggcctagaagatattgtggcggtcaatgcactgtaccggccgggtccgatggaa
aatattccgttatttatcgaccgtaaacacggtcgggcgcctgttcactatcctcatgaa
gatttaaggagcattttggaagatacatatggcgtcattgtgtatcaggaacaaattatg
atgattgcttcccgtatggcggggttttctttaggcgaagcggacctattgagaagggcg
gtcagcaaaaagaaaaaagaaatcctggacagagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaggtctacgatttaatcgtcaaattc
gcaaactatggctttaacagaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatctctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaataaaagcagttttccgtttacagttgaaaacggatctgtcaga
tacagcctccgcgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaaatgcttgaagcacttatcttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgttttcaattaagccgaagtat
gtggagacggaggagcttcctctggtggatttacttgcgtttgaaaaggaaacgcttggc
atttatttttcaaatcatcccctctccgccttccgaaaacagctcactgcgcaaggagca
gtctccattctgcaggctcagcgggcagtcaaaaggcagctttcactaggcgttctgctg
tcgaagatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gatgaaaccggcgagatggaagccgtagtcttccctgaacaattcagacagctttctccc
gttttaagagaaggcgctcttttgttcactgcggggaaatgtgaagttagacaagataag
atccaattcatcatgtcccgggcagaattattagaagatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcacagccaggagatcctggcaaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcaaaaa
cagacgattaagctacctgagtcgttccatatcaatgcagatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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